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Literature-curated protein interaction datasets

Nature MethodsPublished 30 December 2008Open access
Michael E. Cusick, Haiyuan Yu, Alex Smolyar, K. Venkatesan, Anne‐Ruxandra Carvunis, Nicolas Simonis
Citations310
SJR quartileQ1
SJR score17.25
SNIP8.40
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TL;DR

An evaluation of existing curation of protein interaction experiments reported in the literature found that curation can be error-prone and possibly of lower quality than commonly assumed.

Abstract

High-quality datasets are needed to understand how global and local properties of protein-protein interaction, or 'interactome', networks relate to biological mechanisms, and to guide research on individual proteins. In an evaluation of existing curation of protein interaction experiments reported in the literature, we found that curation can be error-prone and possibly of lower quality than commonly assumed.

Keywords

Biochemistry, Genetics and Molecular Biology